Hadoop-BAM 7.1.0
Free Version
Publisher Description
Hadoop-BAM is a Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework with the Picard SAM JDK, and command line tools similar to SAMtools.
The file formats currently supported are BAM, SAM, FASTQ, FASTA, QSEQ, BCF, and VCF.
For a longer high-level description of Hadoop-BAM, refer to the article "Hadoop-BAM: directly manipulating next generation sequencing data in the cloud" in Bioinformatics Volume 28 Issue 6 pp. 876-877, available online at:
Note that the library part of Hadoop-BAM is mainly for developers with experience in using Hadoop. The command line tools of Hadoop-BAM should be understandable to all users, but they are limited in scope.
See the SeqPig project for a higher-level interface to the file formats supported by Hadoop-BAM:
See Seal for Hadoop-based read alignment tools, Seal:
About Hadoop-BAM
Hadoop-BAM is a free software published in the Computer list of programs, part of Education.
This Computer program is available in English. It was last updated on 22 April, 2024. Hadoop-BAM is compatible with the following operating systems: Linux, Mac, Windows.
The company that develops Hadoop-BAM is aalto-cloud. The latest version released by its developer is 7.1.0. This version was rated by 1 users of our site and has an average rating of 4.0.
The download we have available for Hadoop-BAM has a file size of 14.50 MB. Just click the green Download button above to start the downloading process. The program is listed on our website since 2015-06-14 and was downloaded 88 times. We have already checked if the download link is safe, however for your own protection we recommend that you scan the downloaded software with your antivirus. Your antivirus may detect the Hadoop-BAM as malware if the download link is broken.
How to install Hadoop-BAM on your Windows device:
- Click on the Download button on our website. This will start the download from the website of the developer.
- Once the Hadoop-BAM is downloaded click on it to start the setup process (assuming you are on a desktop computer).
- When the installation is finished you should be able to see and run the program.
